Manganese-Binding Lipoprotein Mnta

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LYS-180   LEU-181  9.9 10.0 3.1 -0.3 45.4 44.4 -3.2
 LEU-181   ALA-182  8.2 8.2 2.0 2.6 75.3 74.4 15.3
 ALA-182   THR-183  10.8 10.8 2.0 -1.7 131.2 130.3 7.6
 THR-183   LEU-184  10.9 10.6 2.8 -1.9 89.9 84.6 12.8
 LEU-184   ASP-185  7.5 7.2 4.2 -2.6 34.3 32.8 8.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-207   ALA-208  10.7 11.0 18.4 -7.4 70.9 81.3 67.0
 ALA-208   PHE-209  8.0 8.0 9.2 -4.1 68.4 71.6 20.8
 PHE-209   LYS-210  6.8 6.7 -4.4 12.1 52.3 49.9 -46.0
 LYS-210   TYR-211  6.1 6.0 -1.3 -7.3 106.4 108.2 -4.0
 TYR-211   PHE-212  3.4 3.5 -0.1 -0.8 149.7 148.3 -32.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 TRP-224   GLU-225  16.6 16.3 -8.8 6.1 88.2 91.1 -102.2
 GLU-225   ILE-226  13.3 12.7 167.6 -97.6 73.7 69.0 357.2
 ILE-226   ASN-227  12.2 12.2 13.5 -128.9 137.2 81.3 319.7
 ASN-227   THR-228  14.6 15.0 -36.2 -1.3 48.1 45.7 392.5
 THR-228   GLU-229  16.6 16.2 -162.8 -6.5 94.6 56.5 -475.2
 GLU-229   SER-230  20.1 17.3 -156.1 60.3 121.0 116.0 -498.4
 SER-230   GLN-231  22.1 20.8 26.6 -14.5 45.0 42.7 130.1
 GLN-231   GLY-232  21.4 20.9 -9.4 3.0 108.6 104.2 -2.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LYS-277   ILE-278  13.7 13.9 -6.1 0.5 84.7 86.1 64.2
 ILE-278   PHE-279  10.3 10.5 18.2 -22.2 116.5 122.5 15.2
 PHE-279   THR-280  8.6 8.6 -21.2 9.7 19.9 24.5 120.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ARG-298   TYR-299  1.8 2.2 4.7 -1.3 97.8 101.0 -19.5
 TYR-299   ASN-300  4.7 5.0 3.7 -1.9 41.2 42.7 10.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees