Poliovirus Receptor-Related Protein 1

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASN-242   VAL-243  6.5 6.6 3.6 2.5 34.7 36.5 69.5
 VAL-243   GLN-244  4.6 4.6 -2.2 5.3 143.9 148.4 21.3
 GLN-244   TYR-245  6.3 6.3 0.2 -5.2 48.5 48.0 8.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 THR-319   ASN-320  12.0 12.3 -14.4 27.9 147.4 151.2 75.3
 ASN-320   PRO-321  11.8 12.0 10.3 1.2 89.0 93.9 -117.5
 PRO-321   ILE-322  11.4 11.8 11.6 -28.1 94.6 98.3 117.2
 ILE-322   GLY-323  7.7 8.0 8.8 -56.8 164.9 156.1 596.8
 GLY-323   THR-324  7.4 7.3 29.0 32.8 157.4 111.7 -645.5
 THR-324   ARG-325  8.0 8.3 -10.7 17.1 86.3 84.7 -40.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees