Putative Iron Binding Protein

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 SER-103   LEU-104  3.5 4.6 1.0 -4.0 60.7 64.2 14.5
 LEU-104   ARG-105  0.4 0.8 18.1 -28.8 112.5 122.1 0.2
 ARG-105   ASP-106  3.8 3.3 65.0 -42.5 75.2 67.5 70.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-237   ASN-238  5.2 5.3 4.2 -26.5 138.0 134.9 79.7
 ASN-238   ILE-239  3.5 3.5 -0.8 10.5 122.5 115.8 21.8
 ILE-239   SER-240  2.1 2.8 1.1 0.7 87.9 84.5 -1.3
 SER-240   GLY-241  5.4 6.2 -19.0 22.6 69.9 60.1 -21.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLN-267   THR-268  9.3 9.3 9.2 -6.4 143.5 149.7 17.9
 THR-268   LEU-269  8.2 8.7 8.1 7.3 95.4 94.4 -14.2
 LEU-269   TYR-270  9.5 9.5 1.0 0.7 39.7 55.1 -21.3
 TYR-270   ALA-271  8.7 7.0 3.8 10.2 90.4 120.8 -11.3
 ALA-271   GLN-272  5.0 4.2 -12.0 -41.5 40.3 39.7 125.0
 GLN-272   ALA-273  5.4 5.5 15.3 -49.2 79.6 90.6 -47.2
 ALA-273   ASN-274  8.7 8.5 9.3 17.2 69.9 43.2 63.7
 ASN-274   TYR-275  7.9 7.6 -38.7 11.4 78.9 86.8 14.6
 TYR-275   GLU-276  4.8 4.5 -6.9 -8.6 138.8 146.8 -48.1
 GLU-276   TYR-277  2.8 2.8 8.9 -5.5 104.8 97.2 -31.5
 TYR-277   PRO-278  1.0 1.5 3.9 -4.2 63.6 61.7 25.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-283   LYS-284  8.7 8.9 -6.1 -17.7 47.7 60.9 53.3
 LYS-284   LEU-285  6.7 6.6 7.7 15.8 70.6 79.6 24.4
 LEU-285   ASP-286  3.2 2.9 8.6 -10.9 138.3 146.6 10.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PHE-292   GLY-293  9.4 9.4 3.0 6.0 104.2 108.5 2.3
 GLY-293   PRO-294  10.9 10.7 -17.6 1.0 38.5 43.7 58.9
 PRO-294   LEU-295  11.6 10.5 6.7 4.3 151.6 152.6 -58.0
 LEU-295   LYS-296  9.8 9.3 0.1 1.7 133.1 134.8 -10.8
 LYS-296   VAL-297  11.8 11.6 -10.6 10.4 41.6 31.4 -27.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees