Myosin

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-199   ALA-200  14.1 14.0 -3.1 11.3 24.2 24.7 -56.4
 ALA-200   GLY-201  12.5 12.0 8.6 -7.4 137.6 128.8 7.1
 GLY-201   ARG-202  14.4 14.5 5.9 -45.2 131.7 140.1 134.4
 ARG-202   ASN-203  16.1 15.8 -45.8 5.2 92.7 74.6 104.4
 ASN-203   GLN-204  19.7 18.7 -155.7 117.9 42.9 59.4 79.1
 GLY-209   VAL-210  19.0 19.0 -166.0 -57.5 75.2 139.4 246.8
 VAL-210   LEU-211  18.7 18.8 71.6 -2.9 82.5 71.7 75.0
 LEU-211   GLU-212  15.1 15.1 -4.6 6.5 169.5 174.0 9.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-244   ILE-245  5.6 5.5 6.0 6.1 72.2 74.2 43.3
 ILE-245   GLN-246  5.4 5.5 1.1 -0.8 51.1 45.8 25.4
 GLN-246   PHE-247  4.1 4.1 4.6 1.1 76.6 70.2 -9.8
 PHE-247   ASN-248  5.7 4.9 -0.5 0.3 143.2 154.2 8.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-253   SER-254  9.3 8.8 13.0 -21.7 158.8 150.9 7.7
 SER-254   GLY-255  7.8 8.0 13.8 -14.1 89.8 85.1 27.4
 GLY-255   ALA-256  8.1 8.8 -3.4 9.2 150.4 146.2 30.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 CYS-442   SER-443  10.0 10.3 -22.3 38.5 144.1 168.7 -24.1
 SER-443   GLU-444  9.1 10.6 -5.9 21.9 96.3 120.4 41.0
 GLU-444   ARG-445  5.7 7.1 -3.5 10.6 75.2 70.4 44.3
 ARG-445   ALA-446  2.1 3.9 31.7 -24.0 137.9 129.4 -13.9
 ALA-446   ALA-447  1.7 1.9 17.2 -6.3 89.1 78.3 5.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PHE-449   ILE-450  0.8 0.3 4.3 -3.1 12.2 17.9 -5.3
 ILE-450   GLY-451  1.2 0.8 -0.8 -7.9 99.7 104.5 0.9
 GLY-451   VAL-452  3.3 3.5 7.9 3.2 14.6 12.1 65.1
 VAL-452   LEU-453  5.3 5.2 3.9 -8.7 80.4 82.6 -16.3
 LEU-453   ASP-454  7.8 7.8 14.2 -13.0 40.6 27.8 -3.3
 ASP-454   ILE-455  10.6 10.2 44.3 -44.1 90.9 92.0 -34.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASP-505   PHE-506  9.1 7.5 9.0 7.5 53.4 59.2 22.9
 PHE-506   GLY-507  7.2 5.0 -16.5 -132.6 130.9 138.7 -146.0
 GLY-507   LEU-508  10.5 7.7 -39.0 51.5 163.7 75.5 7.6
 LEU-508   ASP-509  8.7 10.0 -143.6 97.9 101.1 102.9 -48.3
 ASP-509   SER-510  10.7 8.9 -130.1 -1.6 153.7 153.2 282.2
 SER-510   GLN-511  11.3 10.1 -20.6 -0.5 97.7 91.7 -7.0
 ASP-505   PHE-506  20.9 21.0 9.0 7.5 66.3 48.8 86.5
 PHE-506   GLY-507  17.2 18.5 -16.5 -132.6 112.2 67.5 -59.5
 GLY-507   LEU-508  18.6 18.3 -39.0 51.5 61.0 104.2 -51.7
 LEU-508   ASP-509  16.7 21.9 -143.6 97.9 31.9 148.0 -42.4
 ASP-509   SER-510  19.0 20.7 -130.1 -1.6 82.8 80.4 106.0
 SER-510   GLN-511  19.2 20.0 -20.6 -0.5 47.1 60.8 46.4
 GLN-511   ALA-512  21.9 23.2 11.6 -1.3 81.5 66.9 14.7
 ASP-505   PHE-506  9.1 7.5 9.0 7.5 53.4 59.2 22.9
 PHE-506   GLY-507  7.2 5.0 -16.5 -132.6 130.9 138.7 -146.0
 GLY-507   LEU-508  10.5 7.7 -39.0 51.5 163.7 75.5 7.6
 LEU-508   ASP-509  8.7 10.0 -143.6 97.9 101.1 102.9 -48.3
 ASP-509   SER-510  10.7 8.9 -130.1 -1.6 153.7 153.2 282.2
 SER-510   GLN-511  11.3 10.1 -20.6 -0.5 97.7 91.7 -7.0
 ASP-505   PHE-506  20.9 21.0 9.0 7.5 66.3 48.8 86.5
 PHE-506   GLY-507  17.2 18.5 -16.5 -132.6 112.2 67.5 -59.5
 GLY-507   LEU-508  18.6 18.3 -39.0 51.5 61.0 104.2 -51.7
 LEU-508   ASP-509  16.7 21.9 -143.6 97.9 31.9 148.0 -42.4
 ASP-509   SER-510  19.0 20.7 -130.1 -1.6 82.8 80.4 106.0
 SER-510   GLN-511  19.2 20.0 -20.6 -0.5 47.1 60.8 46.4
 GLN-511   ALA-512  21.9 23.2 11.6 -1.3 81.5 66.9 14.7
 ALA-512   THR-513  24.8 25.5 -6.3 0.8 83.5 87.5 -10.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 THR-647   THR-648  10.0 10.7 -11.8 8.1 76.8 72.3 -22.8
 THR-648   ASN-649  7.1 7.8 -1.7 -2.6 34.2 38.2 5.8
 ASN-649   PRO-650  7.3 7.9 6.6 -2.9 128.7 126.8 18.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees