Glyceraldehyde-3-Phosphate Dehydrogenase
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
LYS-45
TYR-46
10.8
10.8
5.2
-8.2
108.4
108.2
-12.3
TYR-46
ASP-47
11.2
11.2
3.9
-11.0
167.6
165.3
205.6
ASP-47
SER-48
10.9
11.1
7.4
3.0
99.7
99.3
-108.9
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
HIS-50
GLY-51
6.7
6.8
-24.7
15.3
13.0
18.6
205.5
GLY-51
ARG-52
7.1
7.0
3.3
-10.3
121.8
123.3
98.0
ARG-52
PHE-53
6.6
6.6
11.4
-14.2
76.9
77.1
-31.5
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
ASN-146
ALA-147
14.6
14.6
-7.7
3.0
60.3
61.0
69.8
ALA-147
SER-148
14.0
13.9
2.5
-11.2
52.9
51.1
-131.4
SER-148
CYS-149
12.6
12.4
-8.4
13.4
109.1
101.2
106.9
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
ALA-213
VAL-214
13.0
13.4
-2.9
4.8
95.2
97.2
59.3
VAL-214
GLY-215
9.6
10.0
0.1
9.5
37.8
38.8
206.6
GLY-215
LYS-216
11.0
11.7
-1.5
6.5
79.0
76.5
-48.9
LYS-216
VAL-217
14.2
14.5
-14.7
7.1
55.9
66.5
-1.4
VAL-217
LEU-218
12.6
12.8
10.1
-9.3
56.9
50.8
-18.3
LEU-218
PRO-219
10.5
10.7
-12.5
10.3
150.9
149.8
35.3
PRO-219
GLU-220
12.5
12.7
1.0
-12.7
41.1
41.3
-279.0
GLU-220
LEU-221
9.9
9.9
18.6
-15.6
85.2
91.3
90.6
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
ARG-231
VAL-232
18.7
18.5
3.0
0.4
115.9
118.1
-93.2
VAL-232
PRO-233
19.0
19.0
1.0
3.8
172.4
171.3
-175.8
PRO-233
THR-234
19.7
19.7
-29.4
25.2
59.5
59.6
321.3
THR-234
PRO-235
16.3
16.1
7.1
7.8
107.1
108.9
-173.2
PRO-235
ASN-236
14.7
13.9
-30.8
34.2
111.1
111.2
-137.6
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
VAL-244
ARG-245
6.3
6.2
-6.8
1.5
37.8
34.3
123.4
ARG-245
LEU-246
5.9
5.9
-7.8
12.2
85.8
82.5
-140.9
LEU-246
GLU-247
4.1
4.3
-6.4
-0.6
22.0
19.2
150.8
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
ALA-262
ALA-263
10.4
10.4
3.0
-8.7
170.1
170.1
131.7
ALA-263
GLU-264
9.2
9.5
0.1
-5.8
123.0
123.3
58.8
GLU-264
GLY-265
12.9
13.1
7.9
2.1
82.3
76.8
-86.8
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
GLU-266
MET-267
12.9
13.1
2.2
-11.2
60.3
58.3
-177.9
MET-267
LYS-268
9.3
9.6
-2.2
12.0
157.4
154.7
253.0
LYS-268
GLY-269
10.3
10.6
1.2
-1.0
48.7
48.1
22.2
GLY-269
VAL-270
8.3
8.3
-10.5
17.3
69.5
70.3
-93.1
VAL-270
LEU-271
6.0
6.1
-2.0
3.4
66.2
68.9
-9.1
LEU-271
GLY-272
4.7
4.7
-3.0
9.2
116.1
117.4
35.4
GLY-272
TYR-273
6.0
6.0
2.3
-5.7
122.8
126.9
43.7
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
THR-281
ASP-282
10.7
10.6
6.2
-2.6
94.9
97.3
25.0
ASP-282
PHE-283
9.4
9.4
-10.9
11.6
104.9
102.4
-24.3
PHE-283
ASN-284
6.0
6.0
11.1
-8.3
124.4
124.8
64.4
ASN-284
GLY-285
6.1
5.7
8.0
-4.9
118.6
116.4
-55.4
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
GLU-286
VAL-287
1.2
1.1
-4.3
7.5
106.8
105.9
51.2
VAL-287
CYS-288
2.6
2.8
-8.0
6.9
168.6
171.1
-22.0
CYS-288
THR-289
2.8
2.9
13.8
-10.6
64.7
69.2
76.5
THR-289
SER-290
2.6
2.7
4.1
-8.6
44.4
46.8
-139.7
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
TYR-311
ASP-312
4.4
4.4
-0.7
9.3
38.0
40.0
-124.0
ASP-312
ASN-313
5.4
5.4
20.8
-9.8
82.5
76.6
37.2
ASN-313
GLU-314
8.2
8.3
-3.7
-12.2
40.7
52.6
269.1
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees