Glutamate Receptor 2

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-110   ILE-111  0.9 0.8 -10.1 -0.4 28.4 26.8 119.4
 GLY-110   ILE-111  0.9 0.8 -10.1 -0.4 28.4 26.8 119.4
 ILE-111   SER-112  2.2 2.1 8.5 -4.4 122.9 123.5 -40.9
 SER-112   ILE-113  1.9 2.0 5.5 -3.6 152.0 151.7 -20.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 TYR-190   LEU-191  5.3 5.2 -1.3 -3.6 24.2 22.5 61.8
 LEU-191   LEU-192  5.1 5.2 -5.0 3.7 72.1 69.6 -34.6
 LEU-192   GLU-193  4.1 4.2 -4.4 -4.5 48.1 46.9 64.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASP-207   THR-208  5.0 5.2 1.3 6.0 42.3 42.3 55.6
 THR-208   MET-209  3.7 3.8 2.9 -1.5 45.8 47.0 7.5
 MET-209   LYS-210  5.4 5.4 1.1 -2.2 37.3 37.7 -11.1
 LYS-210   VAL-211  5.1 5.0 -3.5 10.0 81.1 81.8 -3.5
 LYS-210   VAL-211  5.1 5.0 -3.5 10.0 81.1 81.8 -3.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LYS-210   VAL-211  5.1 5.0 -3.5 10.0 81.1 81.8 -3.5
 LYS-210   VAL-211  5.1 5.0 -3.5 10.0 81.1 81.8 -3.5
 VAL-211   GLY-212  7.4 7.3 -1.6 -4.4 30.8 26.1 57.9
 GLY-212   GLY-213  8.8 8.9 11.4 -9.5 139.0 137.5 -10.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees