B-Cell Mitogen

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-125   TYR-126  20.9 20.4 -11.8 8.4 123.4 122.4 -35.7
 TYR-126   LEU-127  19.3 19.2 -61.3 -44.4 139.4 138.6 -490.7
 LEU-127   ASN-128  17.1 16.6 14.5 -7.8 35.4 105.6 -2.4
 ASN-128   MET-129  17.1 12.8 -39.6 -139.9 103.3 68.7 78.3
 MET-129   CYS-130  13.3 12.7 -39.9 -139.6 41.1 82.5 535.2
 CYS-130   GLY-131  10.4 9.8 -127.8 133.5 106.7 116.7 67.7
 GLY-131   HIS-132  6.9 8.3 49.9 2.6 133.9 120.0 -274.8
 HIS-132   ASN-133  5.1 5.8 10.9 12.9 100.9 101.4 -35.0
 ASN-133   SER-134  7.8 8.1 2.9 -1.6 36.6 35.7 54.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASN-183   ALA-184  6.9 6.9 2.7 7.5 43.7 43.8 70.9
 ALA-184   SER-185  4.9 4.9 -3.8 9.3 117.4 120.2 5.7
 SER-185   ILE-186  2.5 2.4 -3.6 -4.1 106.8 104.4 -24.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-365   THR-366  2.9 3.1 -11.1 12.4 112.1 117.0 -10.1
 THR-366   GLY-367  2.2 2.8 6.7 -1.9 13.6 10.4 63.8
 GLY-367   LYS-368  2.4 2.7 -19.2 11.7 113.5 116.5 -32.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees