Glutamate Receptor Ionotropic, Nmda 2A
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
THR-134
GLY-135
4.3
4.2
6.5
9.9
29.7
36.4
74.1
GLY-135
ILE-136
2.8
2.1
19.3
-26.9
100.7
104.4
-10.3
ILE-136
SER-137
3.9
3.2
19.8
-14.7
121.8
120.1
33.8
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
VAL-232
THR-233
11.4
10.9
6.0
4.9
158.5
163.8
-78.5
THR-233
ILE-234
9.7
9.3
-19.7
-42.3
63.5
58.7
215.0
ILE-234
GLY-235
11.7
11.2
-33.2
9.4
98.3
47.3
32.6
GLY-235
SER-236
12.6
9.9
-11.6
-18.8
47.4
30.4
146.5
SER-236
GLY-237
10.8
9.2
8.9
132.2
157.0
128.7
-524.3
GLY-237
TYR-238
13.4
11.1
-106.8
22.4
51.2
23.7
422.5
TYR-238
ILE-239
12.0
11.1
-14.0
-6.0
81.7
64.3
56.1
ILE-239
PHE-240
8.2
9.3
-172.7
-37.0
9.5
84.2
-539.1
PHE-240
ALA-241
6.9
5.7
14.1
-144.7
99.9
81.5
29.5
ALA-241
THR-242
4.6
4.9
90.8
-16.6
42.8
32.7
281.8
THR-242
THR-243
6.4
5.9
11.4
4.2
104.5
108.1
-27.8
THR-243
GLY-244
6.7
6.0
-4.0
2.4
156.5
149.9
-5.7
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees