Glutamate Receptor Subunit 2

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-110   ILE-111  2.0 2.1 9.8 0.7 19.9 21.9 178.5
 GLY-110   ILE-111  2.0 2.1 9.8 0.7 19.9 21.9 178.5
 ILE-111   SER-112  3.7 3.7 -4.9 2.2 122.1 123.8 4.4
 SER-112   ILE-113  1.9 1.7 -12.6 4.9 157.2 158.3 -127.8
 ILE-113   MET-114  2.6 2.6 -0.6 -3.3 49.9 48.6 15.1
 ILE-113   MET-114  2.6 2.6 -0.6 -3.3 49.9 48.6 15.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-113   MET-114  2.6 2.6 -0.6 -3.3 49.9 48.6 15.1
 ILE-113   MET-114  2.6 2.6 -0.6 -3.3 49.9 48.6 15.1
 MET-114   ILE-115  1.1 1.0 10.1 -12.0 152.1 151.5 -3.6
 ILE-115   LYS-116  1.2 1.3 2.4 -7.0 132.8 131.9 23.5
 LYS-116   LYS-117  0.6 0.8 5.4 -4.2 84.1 82.7 7.6
 LYS-116   LYS-117  0.6 0.8 5.4 -4.2 84.1 82.7 7.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LYS-116   LYS-117  0.6 0.8 5.4 -4.2 84.1 82.7 7.6
 LYS-116   LYS-117  0.6 0.8 5.4 -4.2 84.1 82.7 7.6
 LYS-117   GLY-118  4.4 4.4 4.7 11.4 49.9 41.5 146.5
 GLY-118   THR-119  6.3 6.1 -22.0 9.5 81.2 74.1 -33.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ARG-180   VAL-181  9.1 9.0 3.2 -2.4 92.8 94.6 32.9
 VAL-181   ARG-182  5.4 5.2 2.8 -5.9 143.0 143.1 45.0
 ARG-182   LYS-183  5.4 5.2 4.5 -3.2 156.6 155.8 -19.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 SER-184   LYS-185  6.1 6.3 7.1 -11.3 70.5 66.8 -13.0
 LYS-185   GLY-186  3.1 3.2 15.2 -6.5 125.4 117.8 -40.2
 GLY-186   LYS-187  3.9 3.8 3.2 -11.4 103.0 105.5 74.8
 LYS-187   TYR-188  7.4 7.2 7.5 -1.3 142.8 146.0 -63.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-191   LEU-192  6.3 6.0 6.0 -1.7 63.8 65.4 -23.7
 LEU-192   GLU-193  6.0 6.0 2.5 11.1 43.3 41.7 158.1
 GLU-193   SER-194  5.2 5.7 -6.4 -6.4 70.3 69.4 17.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LYS-210   VAL-211  3.4 3.5 3.9 -7.1 94.8 95.6 -0.1
 VAL-211   GLY-212  5.0 5.2 -0.3 -0.3 34.8 34.5 5.1
 GLY-212   GLY-213  6.9 7.0 -7.6 -1.1 31.5 35.8 135.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASP-216   SER-217  5.8 5.9 -4.2 0.6 77.2 75.5 29.5
 SER-217   LYS-218  2.1 2.1 8.1 -0.3 64.5 66.9 80.7
 ASP-216   SER-217  4.3 4.4 -4.2 0.6 107.9 106.0 10.7
 ASP-216   SER-217  5.8 5.9 -4.2 0.6 77.2 75.5 29.5
 SER-217   LYS-218  2.1 2.1 8.1 -0.3 64.5 66.9 80.7
 ASN-214   LEU-215  3.1 3.0 9.2 -11.5 69.4 68.7 -9.8
 LEU-215   ASP-216  5.4 5.5 5.4 0.4 15.3 19.6 110.9
 ASP-216   SER-217  4.3 4.4 -4.2 0.6 107.9 106.0 10.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees