Adp-Specific Phosphofructokinase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i		 Residue
i+1		 Distance of hinge axis to residue i in conformer 1
(A) 		Distance of hinge axis to residue i in conformer 2
(A) 		Change in psi (i)
(deg) 		Change in phi (i+1)
(deg) 		Angle of psi(i) axis to hinge axis conformer 1
(deg) 		Angle of psi(i) axis to hinge axis conformer 2
(deg) 		Percentage Progress
 SER-305   VAL-306  8.6 8.5 -0.5 0.2 63.5 63.3 -11.0
 VAL-306   GLY-307  5.2 5.1 -0.4 -0.5 131.4 132.0 -33.5
 GLY-307   ILE-308  5.7 5.7 -0.5 -1.2 77.4 77.3 8.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees

Residue
i		 Residue
i+1		 Distance of hinge axis to residue i in conformer 1
(A) 		Distance of hinge axis to residue i in conformer 2
(A) 		Change in psi (i)
(deg) 		Change in phi (i+1)
(deg) 		Angle of psi(i) axis to hinge axis conformer 1
(deg) 		Angle of psi(i) axis to hinge axis conformer 2
(deg) 		Percentage Progress
 LEU-340   GLY-341  7.3 7.1 2.7 4.7 2.2 2.2 111.3
 GLY-341   GLY-342  6.9 6.8 -4.3 3.1 114.5 112.5 -13.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees

Residue
i		 Residue
i+1		 Distance of hinge axis to residue i in conformer 1
(A) 		Distance of hinge axis to residue i in conformer 2
(A) 		Change in psi (i)
(deg) 		Change in phi (i+1)
(deg) 		Angle of psi(i) axis to hinge axis conformer 1
(deg) 		Angle of psi(i) axis to hinge axis conformer 2
(deg) 		Percentage Progress
 ARG-421   PHE-422  5.8 5.6 0.2 -5.0 116.9 116.8 106.0
 PHE-422   GLU-423  2.3 2.1 4.6 -7.3 52.2 52.5 3.1
 GLU-423   GLU-424  1.4 1.3 3.6 0.5 89.1 87.7 -61.0
 GLU-424   ALA-425  5.3 5.1 1.1 -4.9 33.6 35.3 -8.9
 GLU-424   ALA-425  5.3 5.1 1.1 -4.9 33.6 35.3 -8.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees

Residue
i		 Residue
i+1		 Distance of hinge axis to residue i in conformer 1
(A) 		Distance of hinge axis to residue i in conformer 2
(A) 		Change in psi (i)
(deg) 		Change in phi (i+1)
(deg) 		Angle of psi(i) axis to hinge axis conformer 1
(deg) 		Angle of psi(i) axis to hinge axis conformer 2
(deg) 		Percentage Progress
 GLU-424   ALA-425  5.3 5.1 1.1 -4.9 33.6 35.3 -8.9
 GLU-424   ALA-425  5.3 5.1 1.1 -4.9 33.6 35.3 -8.9
 ALA-425   LYS-426  5.4 5.4 3.4 1.2 89.3 90.6 10.4
 LYS-426   SER-427  5.1 5.3 -1.3 -7.6 58.1 56.8 -41.6
 SER-427   ARG-428  7.7 7.7 15.9 -15.3 58.5 61.8 58.3
 ARG-428   LEU-429  9.9 9.8 0.9 10.5 35.9 31.8 75.5
 ARG-428   LEU-429  9.9 9.8 0.9 10.5 35.9 31.8 75.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees

Residue
i		 Residue
i+1		 Distance of hinge axis to residue i in conformer 1
(A) 		Distance of hinge axis to residue i in conformer 2
(A) 		Change in psi (i)
(deg) 		Change in phi (i+1)
(deg) 		Angle of psi(i) axis to hinge axis conformer 1
(deg) 		Angle of psi(i) axis to hinge axis conformer 2
(deg) 		Percentage Progress
 ARG-428   LEU-429  9.9 9.8 0.9 10.5 35.9 31.8 75.5
 ARG-428   LEU-429  9.9 9.8 0.9 10.5 35.9 31.8 75.5
 LEU-429   ARG-430  9.4 9.5 -2.1 6.5 87.6 85.7 17.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees