Myosin

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 HIS-485   MET-486  5.9 4.9 4.0 -18.3 133.4 136.8 0.6
 MET-486   PHE-487  3.2 2.3 1.1 -60.6 156.6 143.7 81.4
 PHE-487   LYS-488  3.3 1.9 13.2 -8.2 122.5 110.2 -0.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-497   LYS-498  10.9 10.9 -140.9 82.5 127.5 148.7 -52.7
 LYS-498   ILE-499  9.1 9.2 75.1 -21.6 102.5 63.1 17.8
 ASP-509   SER-510  11.3 9.1 136.4 -4.8 176.4 157.9 -171.6
 SER-510   GLN-511  10.4 9.2 12.2 5.1 107.5 101.2 -8.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-680   VAL-681  6.1 6.8 37.3 4.9 128.3 115.6 -33.7
 VAL-681   LEU-682  8.5 8.6 -3.5 2.5 42.2 15.5 5.8
 LEU-682   GLU-683  10.7 10.2 -8.6 -1.1 50.9 52.7 -7.2
 GLU-683   GLY-684  8.2 7.2 14.0 -10.9 132.6 93.4 7.4
 GLY-684   ILE-685  6.0 5.7 1.1 2.2 136.4 129.7 -4.6
 ILE-685   ARG-686  9.3 8.8 4.8 -2.4 133.7 156.5 -10.7
 ARG-686   ILE-687  10.3 7.8 2.2 -2.7 132.4 111.5 15.6
 ILE-687   THR-688  6.9 4.4 17.9 -5.4 134.6 106.5 -14.7
 THR-688   ARG-689  6.8 7.1 -3.6 -15.6 51.2 26.9 5.5
 ARG-689   LYS-690  10.2 8.6 -29.3 14.6 32.9 36.3 34.0
 LYS-690   GLY-691  9.0 5.9 -11.8 -9.0 43.9 74.1 17.1
 GLY-691   PHE-692  6.5 4.4 -36.5 4.0 59.6 78.8 17.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees