Slr1257 Protein

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 SER-110   VAL-111  5.1 5.3 -9.2 -4.6 131.5 130.2 -293.3
 VAL-111   GLY-112  4.8 4.8 6.7 -3.0 75.4 76.4 113.1
 GLY-112   ASP-113  8.5 8.5 -4.3 5.0 144.4 146.4 37.2
 ASP-113   LEU-114  8.5 8.5 -6.2 10.4 149.7 149.4 112.1
 LEU-114   LYS-115  6.9 6.8 -7.1 -0.2 117.2 118.6 -136.2
 LYS-115   ASN-116  10.5 10.5 1.6 5.8 37.0 43.3 297.4
 ASN-116   LYS-117  11.6 11.6 3.3 -5.8 57.9 57.4 -95.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ARG-123   ASP-124  11.9 12.0 1.6 1.3 55.7 56.9 81.2
 ASP-124   THR-125  14.8 14.8 0.8 -5.1 41.4 42.9 -22.3
 THR-125   THR-126  12.9 12.7 -0.4 -2.5 134.3 134.6 -117.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASP-129   TRP-130  12.2 12.2 -6.4 5.2 49.5 51.9 63.9
 TRP-130   ALA-131  9.2 9.2 -3.2 0.9 114.5 114.1 -29.3
 ALA-131   ASN-132  7.8 7.8 -5.9 7.5 94.3 94.6 2.4
 ASN-132   PHE-133  11.4 11.4 -5.5 2.7 25.9 26.4 80.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-156   GLU-157  4.3 4.3 -5.9 10.7 123.6 129.1 82.0
 GLU-157   ALA-158  5.8 5.9 -1.3 -4.3 129.3 127.7 -82.2
 ALA-158   VAL-159  2.8 2.9 1.5 0.9 106.7 106.3 -6.3
 VAL-159   MET-160  1.8 1.8 1.7 -0.6 27.1 27.8 31.4
 MET-160   PHE-161  3.3 3.3 1.3 -0.2 99.5 99.8 32.6
 PHE-161   ASP-162  6.9 6.9 4.1 -1.0 35.8 34.7 114.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-176   ASN-177  14.6 14.6 6.8 -10.8 131.3 139.2 178.4
 ASN-177   LEU-178  14.9 15.2 -11.2 23.2 70.6 68.2 -144.5
 LEU-178   GLU-179  11.4 11.5 7.3 -3.0 165.4 165.8 -172.0
 GLU-179   VAL-180  10.6 10.6 -0.6 -3.4 68.3 70.3 89.7
 VAL-180   THR-181  8.4 8.4 -4.0 4.2 32.4 29.3 23.7
 THR-181   GLU-182  6.8 6.9 -4.0 3.8 147.6 146.1 21.8
 THR-181   GLU-182  6.8 6.9 -4.0 3.8 147.6 146.1 21.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 THR-181   GLU-182  6.8 6.9 -4.0 3.8 147.6 146.1 21.8
 THR-181   GLU-182  6.8 6.9 -4.0 3.8 147.6 146.1 21.8
 GLU-182   ILE-183  6.6 6.8 -2.8 6.2 102.1 101.8 -25.6
 ILE-183   ARG-184  2.8 3.0 -1.1 -0.2 83.3 83.5 68.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees