Glutamate Receptor Ionotropic, Nmda 2A
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
THR-134
GLY-135
4.7
4.5
3.5
11.0
31.2
37.7
57.1
GLY-135
ILE-136
3.2
2.6
14.1
-26.0
101.2
102.3
-7.1
ILE-136
SER-137
3.9
3.2
13.1
-12.8
123.5
120.9
43.0
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
VAL-232
THR-233
11.1
10.4
13.2
-0.7
160.1
167.1
-83.7
THR-233
ILE-234
9.6
9.1
-9.8
-49.0
65.0
62.4
197.5
ILE-234
GLY-235
11.7
11.0
-25.0
-9.0
98.0
45.1
49.7
GLY-235
SER-236
12.7
9.5
0.1
-6.3
134.1
157.7
29.6
SER-236
GLY-237
11.1
9.1
-2.3
147.8
24.4
61.0
-482.1
GLY-237
TYR-238
13.7
11.8
-64.0
-31.7
51.2
26.6
485.6
TYR-238
ILE-239
12.2
11.4
-13.8
-3.9
80.2
63.1
42.0
ILE-239
PHE-240
8.5
9.8
-161.5
-49.9
7.8
81.9
-546.2
PHE-240
ALA-241
7.2
6.2
3.9
-131.4
101.5
81.2
34.7
ALA-241
THR-242
5.1
5.6
93.8
-20.9
43.9
30.9
272.0
THR-242
THR-243
6.8
6.4
3.4
14.6
106.1
106.5
-16.1
THR-243
GLY-244
7.0
6.2
-7.4
1.2
155.1
145.9
-24.3
GLY-244
TYR-245
8.1
7.9
-2.3
-3.3
95.6
94.4
18.1
TYR-245
GLY-246
8.9
9.2
-3.7
6.2
79.6
74.3
21.7
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees