Hemagglutinin Ectodomain (Soluble Fragment, Tbha2)

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASN-104   GLN-105  4.5 3.7 -0.4 17.9 101.4 80.3 -196.5
 GLN-105   HIS-106  5.7 4.4 -53.2 -132.8 117.4 119.9 87.4
 HIS-106   THR-107  2.5 2.8 -42.7 -5.3 172.2 68.7 -17.7
 THR-107   ILE-108  3.7 1.2 -27.4 95.7 122.6 38.0 6.2
 ILE-108   ASP-109  1.7 2.6 144.7 67.7 132.8 68.2 -9.2
 ASP-109   LEU-110  3.7 5.8 -140.8 1.9 111.6 123.5 -30.3
 LEU-110   THR-111  7.2 5.8 -61.2 26.1 93.2 53.1 17.5
 THR-111   ASP-112  8.9 7.1 0.8 -7.5 18.1 119.4 -5.5
 ASP-112   SER-113  7.6 8.6 -162.0 -20.7 121.0 127.7 56.3

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Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees