Probable Serine/threonine-Protein Kinase Pknb

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-17   GLY-18  8.3 9.3 -8.9 9.5 138.3 152.8 -11.6
 GLY-18   PHE-19  6.8 7.6 22.8 -14.4 107.2 97.0 -27.0
 PHE-19   GLY-20  6.8 6.2 50.8 -49.8 31.9 26.2 9.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 MET-22   SER-23  7.6 7.2 18.7 7.7 29.8 31.8 105.9
 SER-23   GLU-24  4.9 4.6 -17.2 16.8 94.3 96.4 -46.6
 GLU-24   VAL-25  4.5 4.9 30.3 -27.0 68.7 70.0 7.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-38   VAL-39  6.8 6.6 12.7 -6.4 100.5 104.3 -2.3
 VAL-39   LYS-40  3.5 3.1 -14.6 12.6 127.0 132.0 -9.8
 LYS-40   VAL-41  1.3 0.5 -7.5 -8.8 56.9 61.4 35.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-60   GLN-61  10.5 9.7 10.2 -2.1 95.3 81.7 12.5
 GLN-61   ASN-62  14.3 13.4 10.6 -30.2 156.8 144.3 94.5
 ASN-62   ALA-63  14.4 13.5 13.1 32.1 101.7 101.4 -48.0
 ALA-63   ALA-64  12.7 10.7 138.9 2.7 46.6 79.2 296.1
 ALA-64   ALA-65  14.7 13.3 154.4 -20.7 107.6 56.8 -91.2
 ALA-65   LEU-66  17.8 14.5 123.0 -17.0 122.3 115.2 -293.5
 LEU-66   ASN-67  17.4 16.6 0.0 33.7 55.4 66.9 66.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-79   ALA-80  7.7 7.7 -12.4 10.8 21.6 29.6 6.6
 ALA-80   GLU-81  6.3 6.5 -7.3 -8.1 83.1 80.7 76.8
 GLU-81   THR-82  8.9 9.3 -15.6 40.9 86.5 77.9 -8.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PRO-88   TYR-89  7.8 7.3 29.0 -28.5 110.9 113.9 0.8
 TYR-89   ILE-90  4.8 4.3 2.9 2.7 110.8 102.9 20.3
 ILE-90   VAL-91  5.8 5.1 5.8 -1.6 82.4 81.0 -8.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees