DNA Polymerase IV (Family Y)
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
ASN-234
GLU-235
17.7
18.8
-59.3
32.4
111.3
103.6
11.4
ASN-234
GLU-235
17.7
18.8
-59.3
32.4
111.3
103.6
11.4
GLU-235
PRO-236
14.6
15.7
-8.5
-25.2
49.8
50.2
14.7
PRO-236
ILE-237
11.7
12.9
7.1
29.7
82.4
77.0
5.9
ILE-237
ARG-238
8.7
9.5
0.1
48.8
85.2
68.3
14.5
ARG-238
THR-239
5.6
7.7
-17.2
27.6
144.9
100.9
3.6
THR-239
ARG-240
2.9
4.0
-4.7
63.6
138.4
166.2
49.2
ARG-240
VAL-241
3.4
3.1
34.9
-179.9
39.4
62.4
-90.8
VAL-241
ARG-242
1.8
1.6
74.5
56.1
24.0
33.9
91.9
ARG-242
LYS-243
2.0
1.1
16.7
-20.2
47.8
34.8
6.7
LYS-243
SER-244
1.9
1.3
-12.1
14.0
145.6
148.5
1.1
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees