Isocitrate Dehydrogenase [Nadp]

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-139   ASN-140  2.6 1.7 0.2 -13.9 111.4 118.0 42.1
 ASN-140   SER-141  3.7 3.5 -39.3 45.7 14.8 8.7 -2.2
 SER-141   ASP-142  3.7 3.4 19.8 -26.2 130.9 127.7 -6.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 MET-561   LEU-562  2.5 3.1 22.7 -1.3 111.5 137.0 -67.2
 LEU-562   SER-563  1.1 0.3 3.8 -4.9 157.5 158.7 6.4
 SER-563   VAL-564  0.2 1.0 -15.3 14.3 55.6 53.5 22.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees