Poly(a) RNA Polymerase Protein Cid1
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
ARG-66
ALA-67
9.3
8.1
-2.5
123.6
72.4
48.6
-204.6
ALA-67
ALA-68
10.9
9.2
-116.5
-84.4
59.2
111.7
115.7
ALA-68
LEU-69
7.8
10.4
31.2
-23.1
52.8
118.9
12.0
LEU-69
ASP-70
5.6
8.6
52.2
-6.5
66.1
65.1
115.8
ASP-70
THR-71
8.6
6.3
92.7
-39.8
128.1
77.7
-11.8
THR-71
LEU-72
9.5
8.9
67.7
-21.7
91.5
109.2
-3.6
LEU-72
ARG-73
6.5
6.8
22.4
3.0
35.0
38.5
41.6
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
VAL-86
ALA-87
1.5
1.1
18.8
13.5
46.3
51.3
56.6
ALA-87
PHE-88
3.4
3.6
4.8
-147.4
115.0
103.9
81.9
SER-90
LEU-91
12.6
7.6
-117.0
-70.5
69.5
104.9
96.3
LEU-91
GLU-92
10.8
10.8
166.8
-19.1
166.0
141.1
-376.7
GLU-92
SER-93
9.4
13.6
0.4
26.3
127.1
104.4
458.9
SER-93
GLY-94
12.7
14.0
38.1
147.8
77.9
85.3
-571.9
GLY-94
LEU-95
14.8
10.9
-64.7
32.1
121.3
166.0
698.5
LEU-95
ALA-96
16.6
11.3
-17.0
25.0
170.0
102.4
-770.4
ALA-96
LEU-97
15.3
14.7
174.6
6.6
61.9
74.2
566.9
LEU-97
LYS-98
17.5
13.4
-72.2
-102.1
118.0
142.1
-325.4
LYS-98
ASN-99
17.1
12.5
-11.5
-153.4
133.8
129.7
-241.8
ASN-99
SER-100
14.0
14.4
-49.5
-79.6
78.5
151.0
529.0
SER-100
ASP-101
11.9
13.0
7.0
24.4
81.4
103.3
42.2
ASP-101
MET-102
8.4
11.7
-33.7
-59.3
25.7
99.2
-389.2
MET-102
ASP-103
5.9
7.9
21.1
24.9
95.2
126.2
543.6
ASP-103
LEU-104
5.9
5.6
-145.9
-16.4
45.6
40.7
-437.8
LEU-104
CYS-105
3.3
3.0
-1.2
11.1
78.8
81.7
-1.3
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
GLY-162
PHE-163
8.2
8.1
-0.5
2.1
47.2
44.9
-7.6
PHE-163
ASN-164
10.3
10.1
18.4
151.6
136.2
136.9
458.0
ASN-164
ASN-165
11.2
11.4
116.5
-4.0
88.5
132.4
-93.2
ASN-165
ARG-166
11.0
12.6
105.5
-0.8
149.3
141.9
-249.1
ARG-166
LEU-167
10.9
10.9
16.6
0.8
98.6
122.1
-27.6
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees