Glutamate Receptor, Ionotropic Kainate 1
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
THR-107
LEU-108
8.6
8.3
17.8
-4.3
108.6
115.4
-45.5
LEU-108
GLY-109
4.9
4.7
-5.3
23.9
139.9
137.7
47.2
GLY-109
ILE-110
2.0
2.0
-39.8
15.5
64.1
72.4
41.1
ILE-110
SER-111
2.8
2.4
-9.9
-2.6
60.5
67.2
8.9
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
ILE-207
GLY-208
10.8
10.8
-8.3
-24.8
23.5
33.5
131.2
GLY-208
GLY-209
11.2
11.3
25.6
-35.4
97.0
89.2
-19.5
GLY-209
LEU-210
10.0
9.0
13.0
8.0
104.2
119.8
-43.9
LEU-210
ILE-211
6.6
6.0
9.0
-7.7
159.0
158.4
4.3
ILE-211
ASP-212
5.5
5.9
-139.1
122.6
71.2
49.3
-27.5
ASP-212
SER-213
2.6
3.4
112.3
-77.9
69.3
57.0
81.1
SER-213
LYS-214
4.7
4.6
-19.5
41.5
79.6
81.6
23.8
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees