3-Phosphoglycerate Kinase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LYS-202   VAL-203  8.1 8.9 -7.7 15.8 114.3 87.4 -5.7
 VAL-203   LEU-204  8.8 9.2 20.8 -54.5 123.8 156.5 93.5
 LEU-204   GLY-205  9.4 9.3 -2.4 -34.8 45.6 48.0 89.0
 GLY-205   ASN-206  11.0 9.9 12.3 -35.1 71.4 75.7 -38.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-224   GLN-225  22.0 21.1 -16.4 7.1 160.5 120.5 -13.9
 GLN-225   LEU-226  20.9 17.9 -22.7 27.9 96.8 53.6 -5.2
 LEU-226   LEU-227  17.5 15.9 -30.8 1.3 78.3 80.7 10.4
 LEU-227   ASP-228  19.3 18.7 -1.2 0.1 139.9 145.3 0.7
 ASP-228   ASN-229  20.7 19.1 -4.3 10.0 111.2 98.8 2.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-394   SER-395  3.5 3.0 7.9 15.6 46.3 45.0 60.2
 SER-395   THR-396  4.6 4.1 -8.8 -10.4 81.8 73.8 18.4
 THR-396   GLY-397  7.5 6.5 2.6 -15.3 48.2 50.1 -12.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees