Putative Tetr-Family Transcriptional Regulator

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-3   ARG-4  21.0 21.4 -15.2 -9.0 81.7 74.2 -18.2
 ARG-4   ARG-5  20.0 20.0 1.6 -0.9 105.9 101.7 1.8
 ARG-5   ASP-6  16.9 16.8 3.8 -0.9 36.2 28.0 7.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 THR-14   ALA-15  9.1 8.8 -5.4 1.4 115.4 114.3 -4.4
 ALA-15   ILE-16  10.2 9.5 -4.4 0.5 97.8 96.0 10.8
 ILE-16   ALA-17  6.8 6.0 -1.7 4.2 31.5 28.9 38.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-52   ALA-53  4.9 5.5 -10.1 -4.8 116.2 124.4 -59.3
 ALA-53   ALA-54  8.4 8.7 6.2 0.1 10.4 15.2 44.9
 ALA-54   LEU-55  7.0 7.0 -1.6 8.7 112.7 116.0 29.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASP-90   ARG-91  4.0 3.8 76.6 -69.5 72.5 82.9 -24.7
 ARG-91   PRO-92  7.3 6.8 10.9 -1.3 41.9 35.2 26.3
 PRO-92   GLU-93  7.2 7.4 -8.4 18.1 164.9 158.4 99.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASN-102   GLU-103  3.5 4.2 -1.4 4.9 45.4 43.6 -32.2
 GLU-103   LEU-104  4.0 4.4 -9.5 -1.6 22.5 25.3 74.3
 LEU-104   ARG-105  2.1 2.8 1.0 -2.6 99.9 98.5 18.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees