Hth-Type Transcriptional Regulator Catm

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LYS-161   GLU-162  9.5 9.8 -16.3 0.0 59.2 59.0 177.1
 GLU-162   GLN-163  6.3 6.6 9.2 -10.0 50.4 55.1 -63.1
 GLN-163   LEU-164  6.6 6.4 11.1 -13.8 89.1 90.1 94.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASP-262   ASP-263  10.8 11.0 10.3 -9.5 72.3 72.7 3.8
 ASP-263   ASP-264  11.4 11.4 1.0 4.3 84.6 82.3 18.3
 ASP-264   ALA-265  8.2 8.2 7.1 -0.4 51.2 45.0 171.1
 ALA-265   TYR-266  6.1 6.4 -7.6 9.1 151.9 146.0 29.6
 TYR-266   SER-267  5.8 6.0 0.0 -11.4 84.8 82.3 -38.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees