Nitrate/nitrite Response Regulator Protein Narl

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-160   ARG-161  6.4 6.1 -2.3 -0.8 148.0 149.3 -46.1
 ARG-161   ASP-162  9.1 8.8 8.3 2.4 41.3 48.5 113.4
 ASP-162   ILE-163  7.7 7.5 -8.8 1.5 107.7 116.5 -49.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-187   LYS-188  2.8 2.8 -3.0 1.9 101.8 100.1 -13.9
 LYS-188   VAL-189  4.6 4.6 12.5 -9.2 38.6 34.7 24.9
 VAL-189   HIS-190  3.2 3.3 -3.6 7.5 78.8 78.0 32.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees