Orotidine Monophosphate Decarboxylase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 SER-187   ALA-188  10.6 10.5 0.2 -2.2 66.7 65.1 -10.1
 ALA-188   PHE-189  8.6 8.5 -0.2 1.3 130.8 129.8 1.0
 PHE-189   VAL-190  5.6 5.5 -4.0 3.9 135.9 136.2 2.4
 VAL-190   LEU-191  6.3 6.4 -1.4 8.9 118.9 120.2 -2.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-208   ASP-209  4.5 8.2 163.7 4.8 59.0 109.3 57.3
 ASP-209   ASN-210  1.4 8.7 -25.5 125.5 164.2 104.1 218.1
 ASN-210   LYS-211  1.7 5.9 39.9 -40.5 58.6 15.9 1.7
 LYS-211   GLN-212  2.3 6.0 176.4 -9.4 92.4 73.2 38.6
 GLN-212   ALA-213  5.2 2.9 -164.8 15.6 130.9 138.0 -302.6
 ALA-213   TYR-214  5.3 4.7 3.3 9.4 8.2 25.9 36.3
 TYR-214   VAL-215  4.2 3.0 -5.8 0.8 106.8 97.7 -1.2
 VAL-215   ILE-216  6.8 5.6 -2.8 -4.6 88.8 91.6 -16.0
 ILE-216   MET-217  9.3 8.1 3.0 3.9 32.8 28.5 21.7
 MET-217   ALA-218  8.8 7.8 -2.6 -6.6 142.9 136.4 -12.7
 ALA-218   GLN-219  8.2 7.5 1.9 1.5 81.7 93.9 0.2
 GLN-219   GLU-220  11.8 10.9 -5.0 0.5 107.1 107.9 -3.9
 GLU-220   ALA-221  13.3 12.4 -0.4 9.7 175.0 172.1 24.1
 ALA-221   LEU-222  11.9 11.4 -8.1 7.1 119.9 112.0 -15.1
 LEU-222   ASN-223  13.3 13.0 2.9 -9.9 99.3 100.9 -14.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees