Transcriptional Regulator (Ntrc Family)

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-156   SER-157  8.2 8.5 -15.4 36.5 56.1 54.8 -112.7
 SER-157   CYS-158  5.0 5.2 -34.7 17.8 17.8 21.7 166.9
 CYS-158   ALA-159  6.5 6.2 38.3 -27.1 94.7 90.4 28.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-165   THR-166  4.7 5.2 -28.4 26.2 13.1 6.6 28.5
 THR-166   GLY-167  5.6 6.3 -19.2 13.6 58.1 55.7 39.6
 GLY-167   GLU-168  4.4 4.8 -4.4 0.2 45.7 49.0 31.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-174   VAL-175  3.8 3.4 -20.9 21.6 54.6 52.1 23.4
 VAL-175   VAL-176  6.0 5.9 -12.8 15.7 49.2 48.0 -38.2
 VAL-176   ALA-177  4.2 4.4 -17.7 -0.2 42.5 39.0 139.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-180   HIS-181  3.4 3.5 3.5 -0.1 36.9 35.2 32.3
 HIS-181   LYS-182  2.9 2.9 -14.4 20.2 127.6 127.5 27.5
 LYS-182   LEU-183  6.4 6.4 -4.4 -0.5 124.9 128.0 -35.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-189   PRO-190  7.7 7.8 12.8 -11.9 19.6 23.4 33.7
 PRO-190   PHE-191  9.6 9.8 -6.5 8.8 136.8 137.5 52.4
 PHE-191   VAL-192  8.0 8.2 -39.9 53.9 131.2 135.2 94.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-305   GLU-306  8.4 8.5 -34.8 27.0 22.2 15.0 37.5
 GLU-306   ILE-307  8.2 9.0 -16.2 8.7 84.9 75.3 -4.9
 ILE-307   PRO-308  6.8 7.4 -3.3 -9.3 11.4 11.3 101.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees