DNA Polymerase IV
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
VAL-30
VAL-31
19.0
19.3
0.5
-1.1
17.2
13.9
-35.0
VAL-31
CYS-32
19.8
19.8
18.8
-5.8
57.0
61.8
168.4
CYS-32
VAL-33
17.3
17.2
-9.8
17.3
171.1
168.8
12.1
VAL-33
PHE-34
16.4
16.1
-11.7
9.4
105.5
106.1
-55.6
PHE-34
SER-35
16.5
16.6
-20.1
29.2
161.3
159.6
48.6
SER-35
GLY-36
14.5
14.1
-146.2
131.6
101.1
132.1
-37.6
GLY-36
ARG-37
16.5
16.3
14.2
-41.3
91.0
64.3
-28.4
ARG-37
PHE-38
13.9
14.0
8.2
16.6
114.1
111.4
-44.8
PHE-38
GLU-39
16.6
16.3
-3.1
14.4
42.7
37.9
-58.4
GLU-39
ASP-40
18.7
18.4
8.8
-18.6
140.6
133.2
70.2
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
PRO-237
ILE-238
37.0
36.9
1.8
4.3
83.1
87.0
35.9
ILE-238
ARG-239
35.8
35.6
24.1
-66.4
24.6
23.6
-390.2
ARG-239
THR-240
35.6
35.1
-7.0
4.2
105.9
112.7
21.3
THR-240
ARG-241
34.9
32.6
-28.1
56.9
126.1
134.9
240.6
ARG-241
VAL-242
31.6
30.4
0.3
23.0
49.7
18.2
132.0
VAL-242
ARG-243
30.3
30.2
-11.1
-11.4
102.0
102.2
-48.1
ARG-243
LYS-244
26.8
26.5
10.7
5.2
34.5
40.6
183.7
LYS-244
SER-245
25.4
25.2
-23.8
34.4
122.2
117.8
69.6
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees