Benzoylformate Decarboxylase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 MET-453   ASN-454  2.5 2.5 3.8 -2.2 40.5 38.1 1.7
 ASN-454   ASN-455  3.8 3.7 3.4 -4.3 67.3 66.3 9.1
 ASN-455   GLY-456  6.2 6.1 1.5 2.6 32.3 30.1 66.3
 GLY-456   THR-457  5.9 5.8 -4.8 -1.5 151.7 151.0 -74.5
 THR-457   TYR-458  4.3 4.2 4.1 -4.8 94.0 95.0 46.2
 TYR-458   GLY-459  3.2 3.2 0.4 2.1 88.6 88.2 72.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-476   ASP-477  3.1 2.9 -3.7 4.8 149.5 147.0 -16.8
 ASP-477   VAL-478  4.9 4.7 -1.0 0.4 107.4 108.6 3.9
 VAL-478   PRO-479  4.9 4.9 -2.2 6.4 133.4 132.3 7.7
 PRO-479   GLY-480  8.3 8.3 2.0 -1.3 74.7 71.2 -6.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees