Adenosylhomocysteinase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-162   VAL-163  52.5 52.6 -5.1 -5.4 115.6 114.9 -6.1
 VAL-163   ASN-164  49.2 49.2 3.4 -107.7 73.0 89.2 -266.7
 ASN-164   ASP-165  47.9 47.7 -82.3 5.3 107.8 146.9 -498.3
 ASP-165   SER-166  44.1 48.3 47.7 -42.9 121.4 32.2 25.1
 SER-166   LYS-167  43.1 46.7 -142.7 -18.1 127.9 117.1 892.7
 LYS-167   MET-168  41.7 43.8 -137.7 67.8 86.7 54.6 145.2
 ARG-175   TYR-176  28.7 32.9 21.4 1.7 90.3 112.1 -212.1
 TYR-176   GLY-177  29.1 30.9 -29.4 178.3 81.8 61.3 811.4
 GLY-177   THR-178  32.9 34.1 77.4 -1.2 151.2 154.9 -625.5
 THR-178   GLY-179  35.5 35.8 -17.3 29.9 29.4 74.5 -24.3
 GLY-179   GLN-180  34.1 33.8 -48.4 -3.4 65.8 53.9 214.7
 GLN-180   SER-181  30.7 30.4 11.2 -0.8 152.7 150.3 -76.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-335   HIS-336  36.1 36.0 -143.1 -14.7 32.4 20.1 1113.8
 HIS-336   PRO-337  34.8 34.9 -0.2 8.5 86.8 78.7 21.4
 PRO-337   VAL-338  32.4 32.4 -11.4 -1.1 75.4 77.9 34.9
 VAL-338   GLU-339  34.0 33.9 5.0 2.6 159.0 159.0 -32.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees