Transcriptional Regulator Niar

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 TYR-64   ILE-65  12.7 12.7 -2.0 6.1 114.1 109.4 -1.4
 ILE-65   TYR-66  8.9 8.9 -8.7 -54.0 58.5 63.7 21.3
 TYR-66   MET-67  7.7 7.8 -2.0 14.0 78.0 122.8 2.5
 MET-67   LYS-68  4.5 4.8 0.5 70.2 73.9 55.0 15.7
 LYS-68   GLU-69  2.9 6.1 55.0 132.7 90.0 107.7 48.1
 GLU-69   ALA-70  3.1 6.9 -111.7 140.4 152.1 41.3 4.5
 ALA-70   ASN-71  4.2 9.9 -128.6 -57.0 115.8 18.6 53.7
 ASN-71   THR-72  6.9 7.9 61.4 63.7 116.1 111.4 -17.6
 THR-72   VAL-73  9.6 9.6 156.0 -50.9 155.1 163.8 -60.7

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Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees