Pyruvate Kinase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-86   PRO-87  2.7 2.7 29.7 -0.1 93.4 104.5 -31.4
 PRO-87   GLU-88  3.8 3.9 -67.4 20.5 34.9 33.7 166.4
 GLU-88   ILE-89  6.6 6.1 6.7 -2.3 98.3 89.3 -66.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASN-178   LEU-179  7.4 7.7 -35.5 22.6 116.2 114.6 -13.9
 LEU-179   PRO-180  8.3 8.6 -7.4 9.9 123.4 114.4 -59.2
 PRO-180   GLY-181  6.5 6.3 168.3 160.2 79.1 78.3 -26.9
 GLY-181   CYS-182  9.5 8.5 40.4 -37.1 33.3 55.0 -37.5
 GLY-181   CYS-182  9.5 8.5 40.4 -37.1 33.3 55.0 -37.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-181   CYS-182  9.5 8.5 40.4 -37.1 33.3 55.0 -37.5
 GLY-181   CYS-182  9.5 8.5 40.4 -37.1 33.3 55.0 -37.5
 CYS-182   ASP-183  10.4 10.5 -10.8 15.2 135.2 151.3 16.5
 ASP-183   VAL-184  10.4 11.2 -21.9 9.6 144.9 137.4 -51.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-186   PRO-187  7.8 8.0 -1.8 -6.1 57.0 66.0 -1.3
 PRO-187   ALA-188  6.7 6.3 -18.6 18.5 104.5 101.8 -15.5
 ALA-188   VAL-189  4.7 4.1 -16.0 13.8 65.5 49.8 17.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees