Human Immunodeficiency Virus Type 1 Reverse Transcriptase
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
THR-215
THR-216
25.8
26.9
17.2
13.4
102.1
85.5
10.9
THR-216
PRO-217
22.3
23.2
48.4
1.2
31.3
17.3
115.6
PRO-217
ASP-218
20.9
21.0
-22.0
1.6
90.2
117.9
-2.5
ASP-218
LYS-219
19.1
20.3
161.9
23.9
96.8
92.2
15.9
LYS-219
LYS-220
15.9
17.8
-87.4
45.7
13.5
129.0
41.1
LYS-220
HIS-221
15.3
16.3
-151.2
-97.4
92.2
65.0
-207.2
HIS-221
GLN-222
11.7
14.8
22.9
-71.3
107.5
170.4
76.0
GLN-222
LYS-223
13.2
14.3
16.1
-57.5
107.2
103.2
59.9
LYS-223
GLU-224
11.4
11.2
63.0
6.4
46.9
124.3
84.7
GLU-224
PRO-225
8.6
8.5
65.7
-43.9
118.3
112.6
-17.3
PRO-225
PRO-226
5.7
5.3
-135.1
-9.0
94.1
134.4
-70.8
PRO-226
PHE-227
3.1
3.3
72.5
-23.4
90.7
88.0
-4.2
PHE-227
LEU-228
6.2
6.8
-0.5
16.5
87.7
85.0
2.3
LEU-228
TRP-229
8.0
8.9
-2.0
7.8
53.2
51.1
-9.9
TRP-229
MET-230
10.1
11.0
-18.9
-29.0
67.9
73.1
22.2
MET-230
GLY-231
12.6
13.8
49.7
28.1
74.9
108.5
-2.5
GLY-231
TYR-232
11.7
12.8
-73.2
36.4
63.4
84.5
-0.1
TYR-232
GLU-233
8.3
9.2
2.4
6.5
60.9
49.6
-19.6
GLU-233
LEU-234
4.9
6.0
-26.6
12.8
42.0
44.7
38.4
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
HIS-315
GLY-316
8.7
8.6
-38.3
74.7
158.4
176.7
102.1
GLY-316
VAL-317
6.9
7.3
-4.6
-11.8
94.9
103.7
-9.9
VAL-317
TYR-318
4.1
4.6
-11.4
-0.3
123.2
118.9
-22.3
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees