DNA Polymerase I
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
ARG-676
ARG-677
9.4
9.8
10.4
-7.1
39.0
37.0
2.2
ARG-677
ASP-678
6.3
6.7
-1.6
4.8
78.1
86.5
3.1
ASP-678
LEU-679
5.2
5.4
15.7
-26.6
91.2
98.6
16.0
LEU-679
ASP-680
1.6
1.9
-0.9
-32.7
42.3
39.8
59.0
ASP-680
ILE-681
1.7
2.4
-17.8
3.5
45.2
50.4
26.4
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
GLY-711
ILE-712
2.2
2.5
-9.3
-2.4
85.5
90.2
-0.3
ILE-712
VAL-713
3.7
4.0
-9.6
3.5
103.9
97.9
-18.4
VAL-713
TYR-714
3.6
4.0
10.9
-23.1
14.6
28.4
-29.1
TYR-714
GLY-715
2.4
2.9
48.3
5.8
49.9
34.3
109.8
GLY-715
ILE-716
4.2
3.9
-135.3
53.5
93.1
91.4
-4.6
ILE-716
SER-717
5.2
4.7
-1.6
48.7
140.4
103.9
61.5
SER-717
ASP-718
7.2
8.1
14.0
12.7
104.3
120.8
-17.3
ASP-718
TYR-719
10.1
11.3
7.3
-7.1
62.2
68.1
-2.1
TYR-719
GLY-720
9.4
11.9
-2.5
5.9
67.2
74.7
-3.9
GLY-720
LEU-721
6.4
9.0
-2.9
5.3
28.8
18.7
-1.6
LEU-721
ALA-722
7.8
9.5
-13.5
15.5
96.4
85.4
5.4
ALA-722
GLN-723
11.4
13.3
-0.8
-6.8
107.2
100.6
0.7
GLN-723
ASN-724
10.9
13.7
6.2
8.6
137.3
132.3
-22.5
ASN-724
LEU-725
9.7
11.8
-34.7
15.6
46.1
38.3
34.9
LEU-725
ASN-726
12.1
13.4
21.8
-17.3
68.8
77.5
-9.0
ASN-726
ILE-727
15.0
16.4
16.4
-3.0
104.9
110.8
-16.0
ILE-727
SER-728
15.8
17.2
8.7
-2.3
38.4
38.7
10.6
SER-728
ARG-729
16.7
18.4
8.9
-17.5
91.3
76.6
-0.7
ARG-729
LYS-730
14.6
16.5
9.6
-10.4
128.4
122.0
3.5
LYS-730
GLU-731
17.3
18.5
10.6
-6.8
163.6
158.0
-8.1
GLU-731
ALA-732
16.5
17.2
-15.1
15.3
78.6
92.1
3.9
ALA-732
ALA-733
12.8
13.6
-4.5
2.1
86.4
97.7
1.6
ALA-733
GLU-734
13.8
14.3
-5.4
-8.2
26.4
36.0
26.4
GLU-734
PHE-735
15.7
15.8
10.8
-7.2
133.8
132.2
-1.7
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees