Chimera Protein Of C-C Chemokine Receptor Type 5 And Rubredoxin

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-218   LYS-219  13.8 14.5 2.9 11.1 157.8 163.2 -25.2
 LYS-219   THR-220  13.9 14.7 -10.7 12.1 69.9 75.0 -0.9
 THR-220   LEU-221  12.4 12.1 4.4 -8.4 63.2 69.5 8.9
 LEU-221   LEU-222  9.8 9.6 32.5 -32.0 113.1 120.9 11.8
 LEU-222   ARG-223  9.0 10.3 141.6 -79.5 145.6 148.4 -88.0
 ARG-223   MET-1001  7.9 7.5 -164.4 -4.8 106.5 70.8 64.3
 MET-1001   LYS-1002  5.8 6.0 161.4 -6.7 69.8 72.5 134.9
 LYS-1002   LYS-1003  3.6 3.7 -12.9 5.9 50.9 47.1 5.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-1051   VAL-1052  7.0 6.7 6.2 0.3 124.7 123.8 -4.3
 VAL-1052   GLU-1053  4.5 4.6 5.7 -5.6 144.8 147.1 1.7
 ARG-232   ASP-233  10.0 9.7 -2.3 3.9 79.3 60.6 -2.9
 ASP-233   VAL-234  13.8 13.5 18.5 12.7 76.0 81.0 25.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees