Glutamate Receptor 4,Glutamate Receptor

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 SER-104   LEU-105  2.8 2.7 -2.3 -4.4 77.7 77.2 114.4
 LEU-105   GLY-106  3.2 3.1 -5.4 6.9 144.0 143.4 -7.0
 GLY-106   ILE-107  6.0 5.9 3.7 -3.8 99.0 100.8 45.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 SER-213   LYS-214  5.8 5.6 -3.1 3.3 71.3 70.0 24.9
 LYS-214   GLY-215  2.1 2.0 4.0 3.7 35.5 38.2 69.7
 GLY-215   TYR-216  1.9 2.0 -6.7 4.4 87.7 91.0 -17.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LYS-249   TRP-250  3.5 3.6 7.6 -5.1 79.3 78.0 32.7
 TRP-250   TRP-251  4.4 4.5 -13.5 17.0 103.4 100.8 22.2
 TRP-251   TYR-252  3.1 3.3 -3.2 -3.6 39.8 34.5 55.9
 TYR-252   ASP-253  2.8 3.0 0.4 1.8 164.5 162.6 -49.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees