Alcohol Dehydrogenase (Holo Form) (E.C.1.1.1.1)

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-169   CYS-170  6.1 6.2 -6.0 0.4 55.5 52.8 61.0
 CYS-170   LEU-171  7.5 7.7 0.0 -10.1 127.7 123.3 49.3
 LEU-171   ILE-172  4.4 4.8 14.4 -7.8 155.6 152.2 -54.3
 ILE-172   GLY-173  4.4 4.2 -17.4 16.1 49.5 45.9 23.1
 GLY-173   CYS-174  7.1 7.3 14.0 -9.2 125.4 122.3 -20.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-175   PHE-176  5.3 5.2 -9.3 21.8 85.0 82.5 -7.6
 PHE-176   SER-177  1.7 1.7 -26.3 26.2 28.7 20.7 -16.2
 SER-177   THR-178  0.8 0.8 -13.5 6.7 43.8 45.3 37.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-290   ILE-291  10.2 10.1 -3.9 0.8 60.1 60.2 64.5
 ILE-291   VAL-292  10.7 11.0 0.5 -17.2 120.9 121.9 136.2
 VAL-292   GLY-293  8.7 9.3 -6.0 93.6 86.7 72.2 -145.4
 GLY-293   VAL-294  11.0 12.5 -24.9 70.7 112.8 132.2 377.6
 VAL-294   PRO-295  14.3 13.9 -6.3 -14.1 72.9 99.4 114.9
 PRO-295   PRO-296  17.0 17.1 9.4 1.8 38.7 94.7 79.0
 PRO-296   ASP-297  17.8 20.6 136.5 78.2 65.3 34.0 -1220.1
 ASP-297   SER-298  21.2 21.6 109.0 134.3 67.1 38.8 1781.1
 SER-298   GLN-299  20.1 22.5 -142.1 8.1 157.3 99.8 -769.3
 GLN-299   ASN-300  22.0 22.3 -47.5 -28.8 116.2 119.6 -363.8
 ASN-300   LEU-301  21.3 21.2 4.6 2.2 113.3 108.8 -20.8
 LEU-301   SER-302  21.3 20.9 -19.2 5.7 144.8 146.0 -90.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-317   ILE-318  4.5 5.1 -10.8 10.5 47.1 42.3 -18.6
 ILE-318   PHE-319  5.5 5.8 8.4 -13.3 123.3 121.9 57.2
 PHE-319   GLY-320  4.0 4.2 -2.2 2.0 89.6 95.4 34.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-366   SER-367  16.2 17.1 -131.4 39.1 124.6 85.2 -249.8
 SER-367   ILE-368  13.3 13.7 62.7 -45.0 139.8 152.3 -238.1
 ILE-368   ARG-369  10.6 11.0 -14.9 27.3 70.5 79.2 -14.6
 ARG-369   THR-370  9.0 9.1 2.7 -5.8 36.5 31.0 11.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees