425Aa Long Hypothetical Proton Glutamate Symport Protein

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-70   ALA-71  25.4 24.3 -97.4 33.2 137.3 150.0 -145.0
 ALA-71   SER-72  25.7 25.7 18.4 -33.8 63.1 83.1 -4.2
 SER-72   ILE-73  21.8 23.1 -136.4 -114.8 130.0 97.8 204.5
 ILE-73   SER-74  19.8 20.2 -114.2 8.8 70.0 133.6 -71.8
 SER-74   PRO-75  20.9 22.1 162.4 -26.2 89.9 39.4 248.1
 PRO-75   ALA-76  18.2 19.5 173.7 -25.1 130.1 40.3 -286.0
 ALA-76   ARG-77  15.3 19.7 -67.1 154.2 37.9 87.4 -105.4
 ARG-77   LEU-78  16.1 21.5 105.8 -101.3 121.4 110.9 -14.6
 LEU-78   GLY-79  18.4 18.9 -164.8 9.3 89.2 128.8 166.0
 GLY-79   ARG-80  16.6 16.9 -128.3 -29.6 62.0 71.1 171.7
 ARG-80   VAL-81  13.0 13.3 58.3 -21.2 166.8 125.4 -104.9
 VAL-81   GLY-82  14.2 13.6 11.8 -29.9 125.2 157.3 41.9
 GLY-82   VAL-83  16.1 14.8 3.4 26.2 106.1 100.9 -17.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PRO-109   GLY-110  12.3 12.5 37.1 -40.9 76.6 77.9 -6.5
 GLY-110   ALA-111  15.4 15.7 -137.0 65.9 120.0 120.5 -72.9
 ALA-111   GLY-112  15.6 15.9 149.7 -171.2 49.0 18.4 -40.2
 GLY-112   ILE-113  17.4 16.0 -171.4 -5.4 62.9 108.7 134.3
 ILE-113   HIS-114  21.1 17.4 -132.4 28.0 89.5 91.9 155.6
 HIS-114   LEU-115  22.1 20.8 30.1 -77.3 47.3 52.1 -83.0
 LEU-115   ALA-116  23.3 23.8 -113.7 -57.8 89.8 75.5 -11.3
 ALA-116   VAL-117  26.4 27.5 -138.0 167.9 32.7 98.6 -73.0
 VAL-117   GLY-118  29.4 28.9 124.4 171.1 86.5 48.4 -89.1
 GLY-118   GLY-119  32.0 32.4 -87.1 -63.5 73.6 123.9 -251.4
 GLY-119   GLN-120  31.5 31.4 -65.2 -24.8 5.6 52.3 227.1
 GLN-120   GLN-121  32.3 32.2 -11.8 13.0 38.7 49.6 5.3
 GLN-121   PHE-122  32.2 29.8 5.3 20.1 128.4 162.9 -59.7
 PRO-128   PRO-129  32.3 36.0 35.4 30.6 139.1 124.8 -70.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLN-220   GLY-221  20.9 20.3 15.3 120.5 101.4 121.5 309.3
 GLY-221   VAL-222  18.3 18.5 -85.6 -33.3 21.3 122.0 -381.4
 VAL-222   HIS-223  18.5 15.5 -57.2 102.2 83.6 133.4 17.1
 HIS-223   VAL-224  17.6 14.0 -17.7 12.8 117.3 162.5 -0.2
 VAL-224   VAL-225  14.4 15.8 -110.4 82.8 46.4 111.4 -4.6
 VAL-225   GLY-226  12.4 13.9 173.5 -131.6 88.3 64.7 33.4
 GLY-226   GLU-227  11.0 10.7 81.0 -0.8 24.2 22.8 183.7
 GLU-227   LEU-228  12.2 12.5 -16.8 11.2 139.8 132.4 -10.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees