3-Deoxy-Manno-Octulosonate Cytidylyltransferase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 HIS-72   ASN-73  12.6 13.2 12.5 6.4 122.7 131.3 -85.8
 ASN-73   SER-74  14.7 15.1 26.1 -55.5 155.5 160.8 164.3
 SER-74   GLY-75  12.4 12.8 22.7 3.1 109.3 95.4 -35.2
 GLY-75   THR-76  10.4 10.3 -7.2 -2.5 100.1 110.7 -51.6
 THR-76   GLU-77  7.5 7.6 -7.1 3.2 158.6 174.8 -11.9
 GLU-77   ARG-78  7.6 8.6 1.8 -7.0 83.5 72.7 -27.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-107   ILE-108  6.2 6.9 2.5 11.6 62.6 62.0 44.0
 ILE-108   VAL-109  3.9 4.4 -3.4 12.1 166.9 162.9 53.0
 VAL-109   ARG-110  4.7 4.9 -17.5 18.1 94.4 90.5 3.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 TYR-189   ALA-190  4.2 4.8 4.1 -18.0 95.9 97.7 58.4
 ALA-190   TYR-191  1.3 1.6 -5.0 -24.1 43.1 52.8 153.5
 TYR-191   ARG-192  2.8 3.0 -7.9 4.4 71.0 52.5 -36.6
 ARG-192   ALA-193  5.2 4.2 1.2 8.9 33.8 25.5 71.3
 ARG-192   ALA-193  5.2 4.2 1.2 8.9 33.8 25.5 71.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ARG-192   ALA-193  5.2 4.2 1.2 8.9 33.8 25.5 71.3
 ARG-192   ALA-193  5.2 4.2 1.2 8.9 33.8 25.5 71.3
 ALA-193   GLY-194  4.0 2.9 15.0 -9.6 48.0 51.8 56.5
 GLY-194   PHE-195  6.2 5.5 5.4 -5.6 96.9 102.0 18.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-230   LYS-231  5.4 5.1 8.2 24.6 24.9 26.5 156.4
 LYS-231   GLU-232  3.3 3.4 -45.0 47.0 112.6 111.3 -39.8
 GLU-232   VAL-233  6.9 7.2 -2.2 0.9 50.3 58.3 -14.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees