Peroxisomal Targeting Signal 1 Receptor

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue i Residue i+1 Distance of hinge axis to residue i in conformer 1 (A) Distance of hinge axis to residue i in conformer 2 (A) Change in psi (i) (deg) Change in phi (i+1) (deg) Angle of psi(i) axis to hinge axis conformer 1 (deg) Angle of psi(i) axis to hinge axis conformer 2 (deg) Percentage Progress  VAL-496   LEU-497  8.1 7.5 2.0 -6.9 169.0 168.3 26.4  LEU-497   PHE-498  9.0 8.4 -0.1 -1.2 59.4 58.2 -12.5  PHE-498   ASN-499  5.3 4.9 -5.6 6.7 97.4 98.3 10.6  ASN-499   LEU-500  5.8 4.2 -16.3 15.3 49.5 51.4 -10.8  LEU-500   SER-501  8.8 7.5 -7.8 9.6 22.3 17.8 -6.4  SER-501   GLY-502  6.6 5.8 13.8 -7.6 92.9 98.3 -1.7 Graph shows rotational transition at bending residues and can be used to identify hinge bending residues. Probably only informative for interdomain rotations greater than 20 degrees

Residue i Residue i+1 Distance of hinge axis to residue i in conformer 1 (A) Distance of hinge axis to residue i in conformer 2 (A) Change in psi (i) (deg) Change in phi (i+1) (deg) Angle of psi(i) axis to hinge axis conformer 1 (deg) Angle of psi(i) axis to hinge axis conformer 2 (deg) Percentage Progress  TYR-522   LEU-523  3.0 2.5 -9.0 18.2 37.1 37.2 -37.2  LEU-523   LEU-524  5.6 5.3 -15.4 -0.3 34.5 40.0 74.1  LEU-524   TRP-525  4.0 3.3 -5.7 15.8 81.3 85.5 -26.6 Graph shows rotational transition at bending residues and can be used to identify hinge bending residues. Probably only informative for interdomain rotations greater than 20 degrees

Residue i Residue i+1 Distance of hinge axis to residue i in conformer 1 (A) Distance of hinge axis to residue i in conformer 2 (A) Change in psi (i) (deg) Change in phi (i+1) (deg) Angle of psi(i) axis to hinge axis conformer 1 (deg) Angle of psi(i) axis to hinge axis conformer 2 (deg) Percentage Progress  LEU-532   ALA-533  5.4 5.6 4.4 -2.9 78.5 70.5 6.9  ALA-533   ASN-534  8.6 8.3 4.1 12.1 27.0 15.4 75.1  ASN-534   GLY-535  8.1 7.1 7.3 -24.9 38.7 45.1 -51.9  GLY-535   ASN-536  6.5 7.2 23.7 -17.1 86.8 101.9 -3.0  ASN-536   GLN-537  10.2 10.8 -3.1 12.2 63.8 52.7 -43.3  GLN-537   SER-538  9.9 10.5 2.0 -7.1 155.6 153.6 46.6 Graph shows rotational transition at bending residues and can be used to identify hinge bending residues. Probably only informative for interdomain rotations greater than 20 degrees