Calmodulin

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-85   ARG-86  4.1 6.4 162.9 -52.3 28.8 66.7 56.7
 ARG-86   GLU-87  1.6 6.5 24.7 -71.5 90.6 8.6 -19.9
 GLU-87   ALA-88  3.1 5.0 -137.0 -101.4 104.5 110.2 39.6
 ALA-88   PHE-89  5.9 6.1 95.5 16.1 18.2 25.2 -162.2
 PHE-89   ARG-90  5.4 4.9 -172.4 -62.4 124.4 119.1 83.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees