Proto-Oncogene Serine/threonine-Protein Kinase Pim-1

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PRO-87   MET-88  3.1 3.1 4.3 -3.6 83.7 83.2 -33.6
 MET-88   GLU-89  1.8 1.8 3.1 0.5 18.7 18.5 103.7
 GLU-89   VAL-90  1.1 1.1 -2.1 -0.3 126.2 123.8 -25.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-103   ILE-104  8.8 8.9 -3.4 -0.7 59.7 64.5 56.8
 ILE-104   ARG-105  5.1 5.2 2.1 2.1 58.7 58.4 43.9
 ARG-105   LEU-106  4.6 4.6 0.8 -2.4 76.9 75.4 10.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-120   GLU-121  1.5 1.5 2.5 -1.8 12.3 13.6 -2.2
 GLU-121   ARG-122  0.4 0.5 -3.5 4.3 100.1 99.7 -28.2
 ARG-122   PRO-123  3.2 3.2 7.4 -2.6 30.1 29.7 51.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees