Lethal Factor

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-300   GLU-301  4.8 4.5 -28.1 51.2 139.4 137.5 37.5
 GLU-301   PRO-302  3.2 2.5 23.2 0.7 81.0 78.1 19.6
 PRO-302   LYS-303  1.1 0.9 57.4 -33.0 120.2 135.7 -42.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASP-382   ILE-383  2.7 3.8 -20.0 27.3 131.6 136.4 12.6
 ILE-383   GLN-384  1.2 0.7 6.6 -11.3 74.9 73.8 -16.1
 GLN-384   PRO-385  3.3 3.1 -7.8 48.4 169.8 157.5 93.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees