Mhc Heavy Chain

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PRO-47   ARG-48  14.1 21.8 39.6 -2.5 150.2 75.2 190.0
 ARG-48   ALA-49  16.7 21.1 -154.3 176.1 85.2 106.5 -172.4
 ALA-49   PRO-50  18.9 17.7 -6.2 -70.4 57.9 150.7 164.5
 PRO-50   TRP-51  22.7 17.3 -133.9 -77.1 39.4 107.2 -118.7
 TRP-51   ILE-52  22.9 14.8 139.4 -30.4 136.9 7.7 25.6
 ILE-52   GLU-53  19.8 13.8 -155.4 -74.1 50.5 102.5 34.0
 GLU-53   GLN-54  21.0 11.4 170.5 -56.7 126.5 16.3 20.3
 GLU-55   GLY-56  21.7 9.7 16.4 -23.5 125.4 123.8 7.3
 GLY-56   PRO-57  21.3 12.0 -36.7 25.8 96.3 23.6 3.0
 PRO-57   GLU-58  18.9 12.7 168.4 -72.5 117.9 91.9 -33.7
 GLU-58   TYR-59  16.9 15.6 -164.0 -10.4 131.0 15.9 42.8
 TYR-59   TRP-60  16.1 17.8 -162.2 -58.3 120.7 67.8 13.3
 TRP-60   ASP-61  14.8 17.7 -16.8 -102.0 58.6 43.2 65.1
 ASP-61   ARG-62  13.0 19.5 -155.0 -97.1 77.6 57.9 -62.7
 ARG-62   ASN-63  11.4 20.3 -167.2 -86.7 138.2 35.6 -13.6
 ASN-63   THR-64  10.3 21.4 -144.0 -57.8 98.2 49.3 -95.5
 THR-64   GLN-65  9.0 22.2 -35.0 -45.9 50.8 29.7 41.9
 GLN-65   ILE-66  7.0 22.0 -31.3 7.7 100.0 91.4 0.4
 ILE-66   PHE-67  5.8 23.6 -163.2 -7.3 139.1 139.4 116.3
 PHE-67   LYS-68  4.4 22.3 172.1 -35.1 105.6 34.7 -91.6
 LYS-68   THR-69  3.2 23.3 135.5 -25.3 121.4 62.0 -28.6
 THR-69   ASN-70  0.8 24.2 -166.4 -97.4 132.4 159.7 56.1
 ASN-70   THR-71  2.2 24.8 -174.6 27.8 119.0 108.7 -43.1
 THR-71   GLN-72  2.1 25.5 -35.6 -10.8 59.3 92.6 29.0
 GLN-72   THR-73  4.4 22.0 4.6 -79.6 80.8 133.0 58.2
 THR-73   ASP-74  5.8 19.8 -173.5 -52.9 149.7 43.3 -16.0
 ASP-74   ARG-75  6.2 20.3 -174.2 -56.6 91.3 66.1 -98.6
 ARG-75   GLU-76  7.9 18.3 158.1 -38.4 113.3 171.7 149.0
 GLU-76   SER-77  10.2 17.6 169.4 -51.7 48.5 107.8 -38.4
 SER-77   LEU-78  11.0 16.8 173.4 1.8 44.3 172.1 -58.6
 LEU-78   ARG-79  11.5 15.0 -166.9 10.5 70.8 61.2 95.1
 ARG-79   ASN-80  14.2 17.2 -11.2 -6.8 82.1 86.7 1.9
 ASN-80   LEU-81  15.8 15.9 38.7 122.1 27.6 24.8 -148.9
 LEU-81   ARG-82  15.9 15.9 65.3 -42.7 67.5 70.7 12.0
 ARG-82   GLY-83  17.3 12.8 43.7 -83.7 108.9 57.0 1.9

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Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees