Pantothenate Kinase 1

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LYS-382   PRO-383  15.7 15.7 -9.7 9.3 97.6 96.1 -62.9
 PRO-383   GLU-384  12.0 12.0 -6.9 3.5 82.8 78.3 32.5
 GLU-384   CYS-385  9.7 9.5 -4.9 -0.4 35.3 36.0 96.8
 CYS-385   TYR-386  7.5 7.3 4.6 -4.8 148.5 145.9 -32.9
 TYR-386   TYR-387  8.2 8.1 -3.2 1.3 44.4 42.7 25.3
 TYR-387   PHE-388  6.7 6.7 -4.2 4.6 34.9 34.1 -40.1
 PHE-388   GLU-389  7.5 7.5 24.1 -22.0 129.1 126.7 -53.0
 GLU-389   ASN-390  9.1 9.2 1.0 -7.9 152.5 150.3 94.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASN-406   PRO-407  8.4 8.5 13.0 3.0 53.0 49.3 149.4
 PRO-407   TYR-408  5.3 5.5 -8.6 6.8 81.3 86.2 5.0
 TYR-408   PRO-409  7.2 7.5 -0.5 -1.4 113.1 113.7 -9.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees