Maltodextrin-Binding Protein

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PRO-107   ILE-108  8.9 8.8 1.8 -2.2 150.9 152.5 -3.3
 ILE-108   ALA-109  9.0 9.1 7.4 -23.1 133.5 133.3 18.4
 ALA-109   VAL-110  5.7 5.8 -9.1 20.7 117.0 115.3 16.6
 VAL-110   GLU-111  2.1 2.1 -12.8 27.6 65.8 60.9 -4.0
 GLU-111   ALA-112  1.9 2.9 0.2 14.1 67.6 81.6 24.6
 ALA-112   LEU-113  4.9 4.8 -14.7 -5.3 47.7 55.4 28.6
 LEU-113   SER-114  8.3 8.4 -8.8 5.8 45.3 40.8 8.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 SER-255   LYS-256  15.1 15.2 -8.8 -1.1 65.5 67.3 10.2
 LYS-256   PRO-257  12.3 12.5 2.1 5.5 104.5 111.6 -1.1
 PRO-257   PHE-258  9.6 9.7 -2.6 -4.9 52.4 44.5 29.1
 PHE-258   VAL-259  6.9 7.4 -17.9 14.9 125.9 123.5 3.5
 VAL-259   GLY-260  3.5 4.0 -0.9 2.8 61.6 55.9 6.7
 GLY-260   VAL-261  1.7 2.6 16.4 4.5 65.3 66.5 41.6
 VAL-261   LEU-262  3.0 3.1 -0.4 2.4 79.0 82.3 16.8
 LEU-262   SER-263  6.5 6.7 -3.8 5.4 70.9 63.8 -4.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-311   ALA-312  5.9 6.0 -3.8 16.0 78.4 81.2 -21.1
 ALA-312   LYS-313  5.1 5.3 -19.0 -5.5 17.8 32.8 62.5
 LYS-313   ASP-314  4.9 4.8 -12.3 17.3 82.3 78.6 30.6
 ASP-314   PRO-315  1.2 1.2 6.4 -3.3 58.3 67.7 7.3
 PRO-315   ARG-316  4.0 2.9 -0.6 3.2 144.4 142.8 8.9
 ARG-316   ILE-317  3.7 3.4 0.3 1.8 37.9 36.0 -6.7
 ILE-317   ALA-318  1.0 0.6 1.0 -4.7 74.9 78.3 12.5
 ALA-318   ALA-319  4.7 4.3 1.6 -6.0 53.9 61.8 -10.0
 ALA-319   THR-320  6.1 6.0 10.7 -2.8 18.7 14.4 12.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLN-325   LYS-326  9.0 9.2 -11.8 13.6 67.0 63.0 -16.5
 LYS-326   GLY-327  11.3 11.5 -12.3 -5.6 39.3 31.4 41.9
 GLY-327   GLU-328  9.3 9.5 -5.3 -17.3 21.9 40.4 62.5
 GLU-328   ILE-329  8.4 8.1 21.1 -10.1 100.0 102.1 -18.7
 ILE-329   MET-330  5.0 4.7 -3.1 -0.5 46.0 30.7 -12.8
 MET-330   PRO-331  3.8 3.9 20.4 -6.3 150.5 140.8 -10.1
 PRO-331   ASN-332  3.5 3.1 25.3 -16.2 106.6 97.3 28.1
 ASN-332   ILE-333  0.4 0.8 -5.9 32.7 11.0 12.0 -67.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees