Sarcoplasmic/endoplasmic Reticulum Calcium Atpase 1

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-41   PRO-42  6.4 6.2 -32.8 -10.0 65.7 72.7 45.4
 PRO-42   ALA-43  7.5 8.1 -35.4 10.9 102.2 132.8 -47.2
 ALA-43   GLU-44  6.6 7.4 -32.3 -23.7 128.2 98.7 -82.3
 GLU-44   GLU-45  8.5 10.8 -108.1 12.6 68.2 129.2 38.4
 GLU-45   GLY-46  12.0 10.9 -12.5 34.4 97.0 104.0 73.2
 GLY-46   LYS-47  12.9 14.1 72.7 56.9 83.9 96.2 -101.6
 LYS-47   SER-48  16.4 17.2 46.9 8.0 54.0 42.0 139.1
 SER-48   LEU-49  17.2 17.6 17.6 -2.0 64.9 58.8 29.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-117   ALA-118  5.6 6.0 11.7 -0.6 57.9 45.3 2.8
 ALA-118   LEU-119  5.5 6.4 -11.1 13.4 57.1 72.6 10.4
 LEU-119   LYS-120  5.3 6.2 60.6 18.4 99.5 84.0 22.8
 LYS-120   GLU-121  1.9 3.0 -28.2 -5.6 126.9 78.9 -26.6
 GLU-121   TYR-122  3.8 5.9 126.1 -41.5 109.1 162.2 -186.3
 TYR-122   GLU-123  7.1 6.1 105.5 33.8 151.8 97.7 441.3
 GLU-123   PRO-124  6.3 8.9 -46.7 1.4 94.9 65.0 -109.8
 PRO-124   GLU-125  9.6 7.7 30.7 -28.7 85.9 126.3 -39.1
 GLU-125   MET-126  10.8 9.5 36.0 12.3 126.4 58.1 40.0
 MET-126   GLY-127  12.8 11.9 99.1 24.6 95.8 115.4 -117.3
 GLY-127   LYS-128  14.6 14.4 36.5 -8.2 31.7 39.5 74.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ARG-236   ASP-237  6.1 4.9 -36.9 19.8 79.9 86.4 -4.7
 ASP-237   GLN-238  7.7 6.8 -27.3 -6.5 142.5 156.5 -95.2
 GLN-238   MET-239  6.7 7.5 63.7 43.6 98.6 61.5 87.6
 MET-239   ALA-240  3.7 3.9 170.4 -8.5 151.9 39.5 36.1
 ALA-240   ALA-241  5.8 3.7 -138.4 118.9 83.1 85.5 66.8
 ALA-241   THR-242  8.0 7.3 -116.7 -26.0 152.5 29.9 -62.9
 THR-242   GLU-243  7.9 9.1 -9.3 130.3 100.9 85.5 -101.6
 GLU-243   GLN-244  7.0 6.6 155.8 46.8 89.1 98.0 119.1
 GLN-244   ASP-245  9.5 9.9 31.4 54.8 98.7 48.2 226.5
 ASP-245   LYS-246  9.8 12.2 -170.6 -9.3 30.5 78.2 -364.9
 LYS-246   THR-247  12.4 15.3 -39.8 -43.0 86.0 39.4 165.1
 THR-247   PRO-248  14.1 16.1 -35.9 9.4 106.3 84.7 16.3
 PRO-248   LEU-249  17.7 19.8 8.6 -20.1 126.7 132.4 18.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees