Mediator Of DNA Damage Checkpoint Protein 1
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
GLU-1992
ARG-1993
12.4
12.1
14.4
0.1
77.7
85.8
-53.9
ARG-1993
ARG-1994
9.4
9.2
17.0
-7.0
81.9
69.7
-80.9
ARG-1994
LEU-1995
6.0
6.1
-31.9
6.7
44.0
39.1
228.5
LEU-1995
LEU-1996
3.4
3.4
-4.8
-4.2
87.3
83.5
18.6
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
PRO-2010
PRO-2011
15.7
15.6
28.2
-2.5
90.3
99.4
-31.8
PRO-2011
PRO-2012
13.7
13.8
-2.0
-4.6
46.3
47.2
38.4
PRO-2012
GLN-2013
11.8
11.8
1.4
-4.8
76.6
77.8
17.8
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
ILE-2018
SER-2019
3.9
4.0
-0.9
-2.8
124.3
122.1
-13.3
SER-2019
CYS-2020
2.7
2.8
7.5
-0.8
91.2
88.5
-15.5
CYS-2020
CYS-2021
1.1
1.1
0.7
-1.8
147.7
145.7
16.4
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
LEU-2070
LYS-2071
8.7
9.0
1.1
-1.7
49.7
53.0
11.6
LYS-2071
GLN-2072
8.0
8.2
2.3
-1.1
98.8
99.8
-8.9
GLN-2072
GLU-2073
5.6
5.6
5.9
13.8
33.1
32.3
174.0
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
ALA-2074
LYS-2075
0.6
0.6
-14.8
6.4
25.0
25.9
67.6
LYS-2075
PRO-2076
2.7
2.5
-5.3
-8.9
91.7
90.1
35.5
PRO-2076
GLU-2077
6.3
6.2
3.1
2.7
144.2
148.4
24.9
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees