Ferredoxin--Nadp Reductase 2

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-128   LEU-129  7.2 7.4 -0.3 15.0 109.7 116.2 12.0
 LEU-129   GLY-130  5.3 5.7 -40.6 40.6 107.1 122.6 1.4
 GLY-130   ALA-131  1.9 2.5 -12.3 40.6 62.7 66.9 -32.5
 ALA-131   PHE-132  2.1 2.4 89.7 -134.5 126.9 132.6 100.1
 PHE-132   GLU-133  2.9 3.0 73.7 -51.3 70.4 75.2 25.2
 GLU-133   PRO-134  5.9 6.3 6.3 5.0 128.4 133.0 -16.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-258   ILE-259  12.8 13.0 -18.2 7.4 95.7 98.7 -4.1
 ILE-259   GLY-260  11.9 11.9 -4.9 14.9 72.6 72.7 -12.0
 GLY-260   PHE-261  8.1 8.2 -43.1 33.9 23.7 27.5 23.8
 PHE-261   LYS-262  6.2 5.7 -12.0 -32.6 50.5 61.4 93.9
 LYS-262   SER-263  6.4 5.2 -13.4 41.5 81.8 56.0 -13.4
 SER-263   ASN-264  6.0 2.6 38.0 26.0 156.1 159.6 -172.4
 ASN-264   LEU-265  5.7 2.6 -65.0 -12.4 69.9 55.7 108.2
 LEU-265   GLY-266  4.5 2.8 -20.5 -59.8 67.8 14.9 165.7
 GLY-266   PRO-267  1.4 2.6 50.4 11.5 163.0 135.4 -124.0
 PRO-267   LEU-268  0.9 0.8 -18.5 -3.2 74.3 79.9 8.3
 LEU-268   ALA-269  4.4 4.4 -15.9 2.3 73.5 74.3 15.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees