Phenazine Biosynthesis Protein Phzf

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 MET-117   ASP-118  7.7 7.9 0.8 -3.9 162.0 161.9 11.1
 ASP-118   GLN-119  7.8 8.0 -6.9 8.6 87.0 83.8 49.1
 GLN-119   PRO-120  7.3 7.5 3.8 -8.1 151.9 152.9 7.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-247   MET-248  4.7 4.8 1.5 7.5 48.5 52.1 30.7
 MET-248   PHE-249  2.8 2.8 -0.8 -0.3 134.8 133.8 27.2
 PHE-249   ALA-250  3.8 3.6 0.3 -0.8 34.5 33.5 -10.1
 ALA-250   LYS-251  2.6 2.5 -4.8 6.7 143.3 142.3 5.0
 LYS-251   ALA-252  3.7 3.7 -1.3 -7.3 135.4 134.9 -97.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-262   GLU-263  3.1 3.3 -3.8 1.1 22.6 20.4 34.6
 GLU-263   VAL-264  4.0 4.0 1.8 1.5 136.7 136.9 -7.9
 VAL-264   SER-265  2.4 2.4 -0.2 -0.4 36.4 37.8 23.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees