Ferric-Iron Binding Protein

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-100   ARG-101  4.8 4.9 8.3 -11.7 116.8 114.2 -11.4
 ARG-101   SER-102  1.9 2.1 10.6 9.9 41.8 45.1 72.8
 SER-102   ARG-103  1.7 1.9 -13.4 10.5 89.4 99.3 -14.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-224   VAL-225  2.1 2.3 28.3 -17.8 30.1 24.7 38.4
 VAL-225   THR-226  0.8 0.4 11.8 -24.9 101.4 104.0 20.1
 THR-226   TYR-227  4.2 4.2 38.4 -28.9 52.4 42.2 28.4
 TYR-227   SER-228  7.0 7.2 -21.5 34.3 108.7 109.1 14.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASN-268   PRO-269  14.1 14.3 5.1 9.6 105.0 99.8 -29.2
 PRO-269   HIS-270  15.0 15.8 -12.1 10.0 26.8 24.0 13.9
 HIS-270   VAL-271  16.7 17.2 -14.0 -6.2 43.1 49.0 54.2
 VAL-271   VAL-272  13.3 13.7 4.8 -20.2 95.3 77.0 28.1
 VAL-272   SER-273  11.4 11.4 16.0 -3.7 111.7 131.1 -31.2
 SER-273   THR-274  7.6 7.8 -4.3 -14.0 30.8 49.0 62.0
 THR-274   PHE-275  6.1 7.6 14.2 17.6 75.0 90.1 58.3
 PHE-275   ASN-276  4.7 4.8 -130.9 121.1 122.0 119.7 -35.1
 ASN-276   LEU-277  7.8 7.8 -39.2 53.8 170.5 156.4 58.9
 LEU-277   GLU-278  7.3 6.1 7.3 24.3 67.3 50.7 58.1
 GLU-278   PRO-279  10.2 8.2 -34.3 -0.2 118.0 122.5 -52.5
 PRO-279   ILE-280  11.0 9.9 -12.7 0.0 143.5 155.9 -27.9
 ILE-280   ALA-281  8.4 7.9 -12.6 11.4 152.2 145.2 -14.0
 ALA-281   LYS-282  10.9 10.7 -19.0 10.1 97.1 95.6 5.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees