Spike Glycoprotein
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
PRO-330
ASN-331
9.3
12.6
0.4
22.9
81.4
80.0
11.8
ASN-331
ILE-332
10.5
12.8
62.5
51.9
43.0
60.2
94.4
ILE-332
THR-333
7.6
9.7
-15.0
-23.6
69.8
165.8
-27.1
THR-333
ASN-334
8.6
9.4
-177.0
124.3
120.5
120.1
-28.4
ASN-334
LEU-335
7.6
6.9
-76.9
13.5
71.4
64.4
51.8
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
GLY-526
PRO-527
0.6
1.3
-9.4
7.4
101.6
106.0
-5.3
PRO-527
LYS-528
3.7
3.2
113.2
-33.3
37.2
19.6
110.2
LYS-528
LYS-529
3.8
4.5
-1.7
5.2
82.7
107.9
-1.9
LYS-529
SER-530
7.6
7.1
70.1
-88.9
72.4
72.6
1.8
SER-530
THR-531
9.1
10.1
4.4
3.2
51.8
47.9
10.1
THR-531
ASN-532
11.7
12.2
2.4
6.1
113.2
100.8
-0.9
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees